My understanding of Microwave Oven Transformers derives from an interest in building Tesla Coils. Tesla coils require a source of high-voltage high-current power, ideally more than 100mA at 6000V. The voltage can be obtained by connecting the high-voltage outputs of two or more MOTs in series. There is a high risk of insulation failure. For this and other reasons you have to be very careful using MOTs in a Tesla Coil. Perhaps the best advice is don't.
Individual transformers are also very dangerous. In normal operation in an oven their output will be at least 0.5A at 2000V. Although the shock alone could easily be fatal, being killed outright might be the least painful option. This is because the 3 or 4 kW available at the output will have no problem striking an arc into flesh and turning you into an electric fire. Burning will continue until someone switches you off.
An MOT could be used for degaussing only by rewinding the secondary with a few turns of very thick wire. 3000 amps at a volt or less would be good. It will still get very hot though!
Ships become magnetised when the steel they are being made of is struck repeatedly in alignment with the earth's magnetic field. The same mechanism probably magnetised Ken's worktop. Rotating the top through 180 degrees and beating it again might undo the effect. Alternatively after using a compass to establish which way round the top is magnetised, stroking it with a strong permanent magnet in the opposite sense might counteract the unwanted magnetism.
Heat also destroys magnetism but you would need to make the whole top very hot. Not sure that's practical!
Cheers,
Dave