You don't share the make or age of motorcycle with us, but generally speaking, many old bike tele forks were made from seamless tubing. The inside diameter was not machined, merely left as rolled. So they may well not be perfectly round nor perfectly parallel. Mostly the pistons were made a loose fit and relied on the piston rings, or O rings in later years, to seal.
+1 on make an ali plug that you can fit the end of the fork leg over while plug is still in the lathe and size it that way. Then bung it on the end of a bit of rod and run it up and down both fork legs to check it will slide all the way up and down without binding. If it binds, knock a couple thou off and try again etc. Then turn your pistons to that final size.