If you are averse to boring out the existing parent bore oversize, and making new brasses,you may be able to centre the bedplate, by mounting a piece of bar in the chuck and turning a section so that it is really snug fit in the existing parent bore and cap. It should be long enough to extend into the existing half bore, to ensure that the bedplate is aligned on the axis of the lathe. Once this alignment has been done, the cross Slide should be locked..
You can them feed your boring bar through to mount between centres, to bore the new, unmachined Cap to match the existing parent bores.
This is effectively the method used in Industry when a new Main bearing Cap has to be fitted and bored for an otherwise finished Crankcase. But in this instance the machine used is a large Borer!
Or if you mount a clock in the chuck, you can use this to ensure that the parent bores are correctly aligned on the centre line, before fitting the Boring Bar.
If you are looking for greater precision, ensure that the present cap is tightened to the correct torque, so that is completely round. (If the torque applied differs from that used when boring originally, the bore is likely to be oval. Too low and the major axis will be in the crown, Too high and it will be across the split line )
Howard