Paul, I am intrigued by your photo- Does the leadscrew pitch actually match up with the shaft? From the photo, contrary to what Mick B1 said, I believe it does – the apparent 'mismatch' before and after the middle appears to me to be an optical illusion due to parallax.
Looking at the leadscrew, the slope of the sides of the thread is clearly seen on both sides of the crest, near the centre of the leadscrew. Higher up in the image, only the lower flank is visible, while lower down in the image, only the upper flank is visible. The machined shaft is of a larger diameter than the screw, and so this same effect is exaggerated even more.
This all due to the camera focus being close to the leadscrew, and field of view very narrow, sort of 'fish-eye' effect..
If the pitch is in fact the same, then the cause is even more intriguing! How 'deep' is the screw effect? Is it more optical, or can you feel it, say with you finger nail?
The. forgive a perhaps silly question, but it it actually a thread, ie , a spiral, and not just 'ribs' ?
As you used auto-feed to machine that shaft, what was the feed speed/gear selection at the time?
Joe