No! Don't alter the crank!
As you said in your first post, that's a single acting twin engine so 180 degrees is right.
A double acting engine needs 90-degree cranks, but that isn't one. A 90 degree crank won't solve the problem and when you do sort it, the engine won't run as well.
The cylinders are positioned facing each other, so if made identically they will be be trying to run in opposite directions. Imagine turning to clocks to face each other – they both run 'clockwise' but their hands don't go the same way.
The answer is as has been mentioned already is to swap over the steam and exhaust for ONE cylinder.
Neil