While CAT6 junction boxes are easily available, best practice frowns upon joins, especially in CAT6 Gigabit links.
Your tester only tests continuity not attenuation.
I suspect that too much signal attenuation may well be the reason because, as the specification says, the maximum connection length is 90m of solid core cable with an additional 5m of flexible patch lead at each end. Pairs should not be untwisted and no more than 12.7mm (1/2"
taken out of the overall cover to make a connection. If this has not been complied with, and some of the connection boxes I have seen will not allow it to be, or alternately excessive bends are present, then the signal may be attenuated too much to work.
If you are trying to make a 10Gb connection the maximum cable length of 55m may have already been exceeded.
I have even seen long cable runs done in flexible cable that did not work because they could not be punched down in the connectors properly.
I would be asking your sparks why he made the join and try to ask him to re do it in one length as it is not to CAT6 specification.
Assuming all of the above is complied with check terminations at each end as if the ground potential at the barn end is different to that at the home end (the largest I have seen is 70V!) a current can flow along the CAT6 cable further degrading the link.