Almost certainly unique – and unless there exist still drawings for the full-size version, perhaps even to the maker’s own design but based on contemporary practice.
If the screws are not Whitworth, what else might they be? Something “standard” only to the builder’s place of employement? Continental?
The feed-pump looks somehow not quite true to the rest of the engine, perhaps a replacement for the original: it seems a different alloy, and with slightly better machining though looking a bit unfinished. This could be contemporary with the replacement column.
I wonder if it once had railings right round it, the missing uprights having been replaced by those countersunk screws.
I’d agree with Charles – just give the old gal enough attention to let it amble round on a modest air supply. Keep the column and pump as they are, as part of the entire machine’s story.